Error ‘read.pcibex’ function in R

[prenaj]

Hello,

I want to merge two similar scripts/experiments into one. When I try to read the output file in R while using the ‘read.pcibex’ function, I get this warning: “Error in read.table (file = file, header = header, sep = sep, quote = quote, :more columns than column names”

I’ve tried comparing the previous output files (from the two separate experiments) with the new one (coming from the merged version) and they look identical in structure.

Here is the link to the previous experiments: https://farm.pcibex.net/r/Bgtrcm/
https://farm.pcibex.net/r/lLfSrh/

And the link with the experiments merged into one:
https://farm.pcibex.net/r/miTmSh/

What could be the issue?

Thank you very much in advance!

[Jeremy]

Hi,

Not sure what the issue is exactly, but usually you can work around this error by passing auto.colnames=FALSE to read.pcibex. Then your data frame’s columns are not automatically named, but you can still name them manually if you want

Jeremy

[Author]

Posts